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Items: 1 to 20 of 21

1.

The Essential Rhodobacter sphaeroides RSP1056-RSP0847 (CenKR) Two-Component System Regulated Tol-Pal and Cell Envelope Biosynthesis

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Other
Scope:
Multiisolate
Great Lakes Bioenergy Research Center, University of Wisconsin - Madison
Accession:
PRJNA774771
ID:
774771

2.

Transcriptome analysis of total RNA from Rhodobacter sphaeroides 2.4.1 wildtype and StsR (RSs0827) deletion strain during different growth phases

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Molecular- and Microbiology, Justus-Liebig University Gießen
Accession:
PRJNA734528
ID:
734528

3.

The NtrYX two-component system regulates the bacterial cell envelope

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Other
Scope:
Multiisolate
Great Lakes Bioenergy Research Center, University of Wisconsin - Madison
Accession:
PRJNA607228
ID:
607228

4.

Co-immunoprecipitation of the small DUF1127 protein RSP_6037xFLAG and pRK0557_3xFLAG for RNA interaction

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Other
Scope:
Multiisolate
Molecular- and Microbiology, Justus-Liebig University Gießen
Accession:
PRJNA605797
ID:
605797

5.

Cereibacter sphaeroides 2.4.1 isolate:ATCC BAA-808

Rhodobacter sphaeroides 2.4.1 transcriptome - 2.4.1_B

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
DOE Joint Genome Institute
Accession:
PRJNA582309
ID:
582309

6.

Cereibacter sphaeroides 2.4.1 isolate:ATCC BAA-808

Rhodobacter sphaeroides 2.4.1 transcriptome - 2.4.1_A

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
DOE Joint Genome Institute
Accession:
PRJNA582308
ID:
582308

7.

Cereibacter sphaeroides 2.4.1

Cereibacter sphaeroides 2.4.1 Genome sequencing

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Genome sequencing
Scope:
Monoisolate
New England Biolabs
Accession:
PRJNA477813
ID:
477813

8.

Cereibacter sphaeroides 2.4.1

Rhodobacter sphaeroides Tn-seq

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Raw sequence reads
Scope:
Monoisolate
University of Wisconsin - Madison
Accession:
PRJNA376384
ID:
376384

9.

Cereibacter sphaeroides 2.4.1

Growth-phase dependent gene regulation in the alpha-proteobacterium Rhodobacter sphaeroides

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Förstner Lab, Information Services, ZB MED - Information Centre for Life Sciences
Accession:
PRJNA292315
ID:
292315

10.

Nextera mate-pair sequencing for 9 bacteria

We provide data for 9 bacteria from the Nextera Mate pair protocol. Sequencing was performed using MiSeq v2 reagents and 2 × 150 bp reads.

Project data type: Other
Scope:
Monoisolate
Illumina Cambridge Ltd.
Accession:
PRJEB8559
ID:
276032

11.

An Integrated Approach to Reconstructing Genome-scale Transcriptional Regulatory Networks

Umbrella project
Timothy Donohue, Bacteriology, University of Wisconsin - Madison
Accession:
PRJNA253117
ID:
253117

12.

Cereibacter sphaeroides 2.4.1

An Integrated Approach to Reconstructing Genome-scale Transcriptional Regulatory Networks [ChIP-Seq]

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Epigenomics
Scope:
Multiisolate
Timothy Donohue, Bacteriology, University of Wisconsin - Madison
Accession:
PRJNA253093
ID:
253093

13.

Cereibacter sphaeroides 2.4.1

RNase J is required for processing of a small number of RNAs in Rhodobacter sphaeroides

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Core Unit Systems Medicine, Medical Department, University of Würzburg
Accession:
PRJNA237547
ID:
237547

14.

Refseq Prokaryotic Genome Annotation Project

Project data type: RefSeq Other
Scope:
Multispecies
NCBI
Accession:
PRJNA224116
ID:
224116

15.

Cereibacter sphaeroides 2.4.1

Comparative analysis of the response to iron-limitation in the presence or absence of oxygen in R. sphaeroides and role of the OxyR protein [RNA-Seq]

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Transcriptome or Gene expression
Scope:
Multiisolate
Molecular- and Microbiology, Justus-Liebig University Gießen
Accession:
PRJNA205629
ID:
205629

16.

Comparative analysis of the response to iron-limitation in the absence of oxygen in R. sphaeroides

Umbrella project
Molecular- and Microbiology, Justus-Liebig University Gießen
Accession:
PRJNA205626
ID:
205626

17.

Cereibacter sphaeroides 2.4.1

Comparison of the effects of PCR on coverage bias in microbial organisms

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Genome sequencing
Scope:
Monoisolate
Broad Institute
Accession:
PRJNA196621
ID:
196621

18.

Cereibacter sphaeroides 2.4.1

Cereibacter sphaeroides 2.4.1 Transcriptome or Gene expression

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Transcriptome or Gene expression
Scope:
Monoisolate
Broad Institute
Accession:
PRJNA86893
ID:
86893

19.

Cereibacter sphaeroides 2.4.1

Rhodobacter sphaeroides 2.4.1 Whole Genome Sequencing Project

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Genome sequencing
Scope:
Monoisolate
Washington University Genome Sequencing Center
Accession:
PRJNA74625
ID:
74625

20.

Cereibacter sphaeroides 2.4.1

Genome sequencing with short reads

Taxonomy:
Cereibacter sphaeroides 2.4.1
Project data type: Genome sequencing and assembly
Scope:
Multiisolate
Broad Institute
Accession:
PRJNA40077
ID:
40077

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